1G3M Transferase date Oct 24, 2000
title Crystal Structure Of Human Estrogen Sulfotransferase In Comp In-Active Cofactor Pap And 3,5,3',5'-Tetrachloro-Biphenyl-4
authors S.Shevtsov, E.V.Petrochenko, M.Negishi, L.C.Pedersen
compound source
Molecule: Estrogen Sulfotransferase
Chain: A, B
Synonym: Sulfotransferase, Estrogen-Preferring
Ec: 2.8.2.4
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ste
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex4t3
symmetry Space Group: P 1 21 1
R_factor 0.193 R_Free 0.219
crystal
cell
length a length b length c angle alpha angle beta angle gamma
62.687 96.894 61.724 90.00 92.58 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand A3P, EDO, PCQ enzyme Transferase E.C.2.8.2.4 BRENDA
related structures by homologous chain: 1AQU, 1AQY
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystallographic analysis of a hydroxylated polychlorinated biphenyl (OH-PCB) bound to the catalytic estrogen binding site of human estrogen sulfotransferase., Shevtsov S, Petrotchenko EV, Pedersen LC, Negishi M, Environ Health Perspect 2003 Jun;111(7):884-8. PMID:12782487
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (113 Kb) [Save to disk]
  • Biological Unit Coordinates (1g3m.pdb1.gz) 108 Kb
  • LPC: Ligand-Protein Contacts for 1G3M
  • CSU: Contacts of Structural Units for 1G3M
  • Likely Quarternary Molecular Structure file(s) for 1G3M
  • Retrieve 1G3M in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1G3M from S2C, [Save to disk]
  • View 1G3M in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1G3M
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1G3M, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1g3ma_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1g3mb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1g3m_A] [1g3m] [1g3m_B]
  • SWISS-PROT database: [P49888]
  • Domain organization of [ST1E1_HUMAN] by SWISSPFAM
  • Other resources with information on 1G3M
  • Community annotation for 1G3M at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science