1G7E Chaperone date Nov 10, 2000
title Nmr Structure Of N-Domain Of Erp29 Protein
authors E.Liepinsh, S.Mkrtchian, M.Barishev, M.Sharipo, M.Ingelman-Sundb G.Otting
compound source
Molecule: Endoplasmic Reticulum Protein Erp29
Chain: A
Fragment: N-Terminal Domain
Engineered: Yes
 Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Jm109
Expression_system_vector_type: Pqe30
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThioredoxin fold as homodimerization module in the putative chaperone ERp29: NMR structures of the domains and experimental model of the 51 kDa dimer., Liepinsh E, Baryshev M, Sharipo A, Ingelman-Sundberg M, Otting G, Mkrtchian S, Structure (Camb) 2001 Jun;9(6):457-71. PMID:11435111
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (652 Kb) [Save to disk]
  • Biological Unit Coordinates (1g7e.pdb1.gz) 32 Kb
  • CSU: Contacts of Structural Units for 1G7E
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1G7E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1G7E from S2C, [Save to disk]
    • View 1G7E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1G7E
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1G7E, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1g7ea_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1g7e_A] [1g7e]
  • SWISS-PROT database: [P52555]
  • Domain organization of [ERP29_RAT] by SWISSPFAM
    • Other resources with information on 1G7E
  • Community annotation for 1G7E at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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