1G7J	Hydrolase Inhibitor Hydrolase	date	Nov 10, 2000
title	Crystal Structure Of Hen Egg White Lysozyme (Hel) Complexed Mutant Anti-Hel Monoclonal Antibody D1.3 (Vlw92h)
authors	E.J.Sundberg, M.Urrutia, B.C.Braden, J.Isern, R.A.Mariuzza
compound		source
Molecule: Anti-Hen Egg White Lysozyme Monoclonal Antibody D Chain: A Fragment: Light Chain Engineered: Yes Mutation: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Anti-Hen Egg White Lysozyme Monoclonal Antibody D Chain: B Fragment: Heavy Chain Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Lysozyme C Chain: C Synonym: Hel Ec: 3.2.1.17		Organism_scientific: Gallus Gallus Organism_common: Chicken Organism_taxid: 9031
symmetry	Space Group: C 1 2 1	R_factor 0.197 R_Free 0.229
crystal cell	length a length b length c angle alpha angle beta angle gamma 123.020 59.150 56.170 90.00 113.96 90.00
method	X-Ray Diffraction	resolution	1.75 Å
ligand		enzyme	Hydrolase E.C.3.2.1.17 BRENDA
related structures	by homologous chain: 1A2Y, 1HEW, 1OP3, 1P7K, 1VFA, 1YIK
Gene Ontology	Chain Function Process Component B C
Primary reference	Estimation of the hydrophobic effect in an antigen-antibody protein-protein interface., Sundberg EJ, Urrutia M, Braden BC, Isern J, Tsuchiya D, Fields BA, Malchiodi EL, Tormo J, Schwarz FP, Mariuzza RA, Biochemistry 2000 Dec 19;39(50):15375-87. PMID:11112523

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk] Biological Unit Coordinates (1g7j.pdb1.gz) 60 Kb CSU: Contacts of Structural Units for 1G7J Likely Quarternary Molecular Structure file(s) for 1G7J Structure Factors (543 Kb) Retrieve 1G7J in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1G7J from S2C, [Save to disk] Re-refined 1g7j structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1G7J in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1G7J

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1G7J, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1g7ja_, region A [Jmol] [rasmolscript] [script source]     - Domain d1g7jb_, region B [Jmol] [rasmolscript] [script source]     - Domain d1g7jc_, region C [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1g7j] [1g7j_A] [1g7j_B] [1g7j_C] SWISS-PROT database: [P01820] [P00698] Domain organization of [HVM44_MOUSE] [LYSC_CHICK] by SWISSPFAM Domains found in 1G7J: [IGv] [LYZ1 ] by SMART

Other resources with information on 1G7J

Community annotation for 1G7J at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Domain movements in 1G7J from the Database of Macromolecular Movements. Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---