1GHU Src Homology 2 Domain date Aug 05, 1996
title Nmr Solution Structure Of Growth Factor Receptor-Bound Prote (Grb2) Sh2 Domain, 24 Structures
authors K.H.Thornton, W.T.Mueller, P.Mcconnell, G.Zhu, A.R.Saltiel, V.Tha
compound source
Molecule: Grb2
Chain: A
Fragment: Sh2 Domain
Synonym: Growth Factor Receptor-Bound Protein 2
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_plasmid: Pgex-Kt
methodSolution NMR
related structures by homologous chain: 1FHS, 1JYU
Primary referenceNuclear magnetic resonance solution structure of the growth factor receptor-bound protein 2 Src homology 2 domain., Thornton KH, Mueller WT, McConnell P, Zhu G, Saltiel AR, Thanabal V, Biochemistry 1996 Sep 10;35(36):11852-64. PMID:8794768
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (618 Kb) [Save to disk]
  • Biological Unit Coordinates (1ghu.pdb1.gz) 25 Kb
  • CSU: Contacts of Structural Units for 1GHU
  • Original NMR restraints for 1GHU from PDB
  • Retrieve 1GHU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GHU from S2C, [Save to disk]
    • View 1GHU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1GHU
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1GHU, from MSDmotif at EBI
  • Genome occurence of 1GHU's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ghu__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ghu] [1ghu_A]
  • SWISS-PROT database: [P62993]
  • Domain organization of [GRB2_HUMAN] by SWISSPFAM
  • Domain found in 1GHU: [SH2 ] by SMART
    • Other resources with information on 1GHU
  • Community annotation for 1GHU at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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