1GNC Growth Factor date Mar 08, 1994
title Structure And Dynamics Of The Human Granulocyte Colony-Stimu Factor Determined By Nmr Spectroscopy. Loop Mobility In A F Bundle Protein
authors T.W.Zink, A.Ross, R.Rudolph, T.A.Holak
compound source
Molecule: Granulocyte Colony-Stimulating Factor
Chain: A
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
methodSolution NMR
related structures by homologous chain: 1CD9

Primary referenceStructure and dynamics of the human granulocyte colony-stimulating factor determined by NMR spectroscopy. Loop mobility in a four-helix-bundle protein., Zink T, Ross A, Luers K, Cieslar C, Rudolph R, Holak TA, Biochemistry 1994 Jul 19;33(28):8453-63. PMID:7518249
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (446 Kb) [Save to disk]
  • Biological Unit Coordinates (1gnc.pdb1.gz) 45 Kb
  • CSU: Contacts of Structural Units for 1GNC
  • Retrieve 1GNC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GNC from S2C, [Save to disk]
  • View 1GNC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1GNC
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1GNC, from MSDmotif at EBI
  • Genome occurence of 1GNC's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1gnc__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 1gnc from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1gnc] [1gnc_A]
  • SWISS-PROT database: [P09919]
  • Domain organization of [CSF3_HUMAN] by SWISSPFAM
  • Domain found in 1GNC: [IL6 ] by SMART
  • Other resources with information on 1GNC
  • Community annotation for 1GNC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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