1GO1 Ribosomal Protein date Oct 15, 2001
title Nmr Structure Of Ribosomal Protein L30e From Thermococcus Ce
authors S.H.Chan, M.Bycroft, S.M.V.Freund, K.B.Wong
compound source
Molecule: 50s Ribosomal Protein L30e
Chain: A
Engineered: Yes
Organism_scientific: Thermococcus Celer
Organism_taxid: 2264
Atcc: 35543
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: C41
Expression_system_plasmid: Prset-A
methodSolution NMR
related structures by homologous chain: 1GO0
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure and thermal stability of ribosomal protein L30e from hyperthermophilic archaeon Thermococcus celer., Wong KB, Lee CF, Chan SH, Leung TY, Chen YW, Bycroft M, Protein Sci 2003 Jul;12(7):1483-95. PMID:12824494
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (28 Kb) [Save to disk]
  • Biological Unit Coordinates (1go1.pdb1.gz) 26 Kb
  • CSU: Contacts of Structural Units for 1GO1
  • Original NMR restraints for 1GO1 from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1GO1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GO1 from S2C, [Save to disk]
  • View 1GO1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1GO1
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1GO1, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1go1a_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1go1 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1go1] [1go1_A]
  • SWISS-PROT database: [P29160]
  • Domain organization of [RL30E_THECE] by SWISSPFAM
  • Other resources with information on 1GO1
  • Community annotation for 1GO1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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