1H2W PROLYL OLIGOPEPTIDASE FROM PORCINE BRAIN date
authors Fulop, V.
compound source
symmetry
R_factor
R_Free 0.230
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.39
ligand GOL enzyme
related structures by homologous chain: 1QFM
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceElectrostatic effects and binding determinants in the catalysis of prolyl oligopeptidase. Site specific mutagenesis at the oxyanion binding site., Szeltner Z, Rea D, Renner V, Fulop V, Polgar L, J Biol Chem 2002 Nov 8;277(45):42613-22. Epub 2002 Aug 28. PMID:12202494
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (140 Kb) [Save to disk]
  • Biological Unit Coordinates (1h2w.pdb1.gz) 135 Kb
  • LPC: Ligand-Protein Contacts for 1H2W
  • CSU: Contacts of Structural Units for 1H2W
  • Likely Quarternary Molecular Structure file(s) for 1H2W
  • Retrieve 1H2W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1H2W from S2C, [Save to disk]
  • View 1H2W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1H2W
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1H2W from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1H2W, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1h2wa1, region A:1-430 [Jmol] [rasmolscript] [script source]
        - Domain d1h2wa2, region A:431-710 [Jmol] [rasmolscript] [script source]
  • Fold representative 1h2w from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1h2w] [1h2w_A]
  • SWISS-PROT database: [P23687]
  • Domain organization of [PPCE_PIG] by SWISSPFAM
  • Other resources with information on 1H2W
  • Community annotation for 1H2W at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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