1H3Z Solution structure of a PWWP domain from Schizosaccharomyces Pombe date
authors Slater, L.M., Allen, M.D., Bycroft, M.
compound source
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffraction, 23 Modelsresolution
Primary referenceStructural variation in PWWP domains., Slater LM, Allen MD, Bycroft M, J Mol Biol 2003 Jul 11;330(3):571-6. PMID:12842472
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (662 Kb) [Save to disk]
  • Biological Unit Coordinates (1h3z.pdb1.gz) 30 Kb
  • CSU: Contacts of Structural Units for 1H3Z
  • Original NMR restraints for 1H3Z from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1H3Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1H3Z from S2C, [Save to disk]
  • View 1H3Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1H3Z
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1H3Z, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1h3za_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1h3z] [1h3z_A]
  • SWISS-PROT database: [O94312]
  • Domain organization of [YH57_SCHPO] by SWISSPFAM
  • Domain found in 1H3Z: [PWWP ] by SMART
  • Other resources with information on 1H3Z
  • Community annotation for 1H3Z at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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