1H59 Insulin date May 21, 2001
title Complex Of Igfbp-5 With Igf-I
authors W.Zeslawski, H.G.Beisel, M.Kamionka, W.Kalus, R.A.Engh, R.Huber, T.A.Holak
compound source
Molecule: Insulin-Like Growth Factor Ia
Chain: A
Fragment: Residues 49-118
Synonym: Igf-I, Igf-Ia, Somatomedin C
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Insulin-Like Growth Factor Binding Protein 5
Chain: B
Fragment: N-Terminal Igf Binding Domain Residue 58-111
Synonym: Igfbp-5, Ibp-5, Igf-Binding Protein 5

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 21 3
R_factor 0.218 R_Free 0.262
crystal
cell
length a length b length c angle alpha angle beta angle gamma
74.385 74.385 74.385 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.1 Å
related structures by homologous chain: 1BOE, 1H02, 1LPH, 1WQJ
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceThe interaction of insulin-like growth factor-I with the N-terminal domain of IGFBP-5., Zeslawski W, Beisel HG, Kamionka M, Kalus W, Engh RA, Huber R, Lang K, Holak TA, EMBO J 2001 Jul 16;20(14):3638-44. PMID:11447105
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (20 Kb) [Save to disk]
  • Biological Unit Coordinates (1h59.pdb1.gz) 49 Kb
  • CSU: Contacts of Structural Units for 1H59
  • Likely Quarternary Molecular Structure file(s) for 1H59
  • Retrieve 1H59 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1H59 from S2C, [Save to disk]
  • View 1H59 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1H59
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1H59, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1h59a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1h59b_, region B [Jmol] [rasmolscript] [script source]
  • Fold representative 1h59 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1h59] [1h59_A] [1h59_B]
  • SWISS-PROT database: [P24593] [P01343]
  • Domain organization of [IBP5_HUMAN] [IGF1A_HUMAN] by SWISSPFAM
  • Domains found in 1H59: [IB] [IlGF ] by SMART
  • Other resources with information on 1H59
  • Community annotation for 1H59 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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