1H72 Transferase date Jul 02, 2001
title Crystal Structure Of Homoserine Kinase Complexed With Hse
authors S.S.Krishna, T.Zhou, M.Daugherty, A.L.Osterman, H.Zhang
compound source
Molecule: Homoserine Kinase
Chain: C
Synonym: Hk
Ec: 2.7.1.39
Engineered: Yes
Organism_scientific: Methanococcus Jannaschii
Organism_taxid: 2190
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 43 21 2
R_factor 0.177 R_Free 0.207
crystal
cell
length a length b length c angle alpha angle beta angle gamma
87.990 87.990 99.300 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand ANP, HSE, TRS enzyme Transferase E.C.2.7.1.39 BRENDA
note 1H72 is a representative structure
related structures by homologous chain: 1H74
Gene
Ontology
ChainFunctionProcessComponent
C


Primary referenceStructural basis for the catalysis and substrate specificity of homoserine kinase., Krishna SS, Zhou T, Daugherty M, Osterman A, Zhang H, Biochemistry 2001 Sep 11;40(36):10810-8. PMID:11535056
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (1h72.pdb1.gz) 106 Kb
  • LPC: Ligand-Protein Contacts for 1H72
  • CSU: Contacts of Structural Units for 1H72
  • Likely Quarternary Molecular Structure file(s) for 1H72
  • Structure Factors (269 Kb)
  • Retrieve 1H72 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1H72 from S2C, [Save to disk]
  • Re-refined 1h72 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1H72 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1H72
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1H72, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1h72c2, region C:168-300 [Jmol] [rasmolscript] [script source]
        - Domain d1h72c1, region C:5-167 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1h72_C] [1h72]
  • SWISS-PROT database: [Q58504]
  • Domain organization of [KHSE_METJA] by SWISSPFAM
  • Other resources with information on 1H72
  • Community annotation for 1H72 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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