1H7I Lipid Binding Protein date Jul 08, 2001
title Apolipoprotein E3 22kd Fragment Lys146gln Mutant
authors B.Rupp, C.Peters-Libeu, J.Verderame
compound source
Molecule: Apolipoprotein E
Chain: A
Fragment: Receptor Binding Domain, Residues 1-191
Synonym: Apoe3
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector: Pet
symmetry Space Group: P 21 21 21
R_factor 0.203 R_Free 0.259
crystal
cell
length a length b length c angle alpha angle beta angle gamma
40.700 52.960 84.420 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.9 Å
related structures by homologous chain: 1BZ4, 1EA8
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (31 Kb) [Save to disk]
  • Biological Unit Coordinates (1h7i.pdb1.gz) 27 Kb
  • CSU: Contacts of Structural Units for 1H7I
  • Likely Quarternary Molecular Structure file(s) for 1H7I
  • Structure Factors (103 Kb)
  • Retrieve 1H7I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1H7I from S2C, [Save to disk]
  • Re-refined 1h7i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1H7I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1H7I
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1H7I, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1h7ia_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1h7i from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1h7i_A] [1h7i]
  • SWISS-PROT database: [P02649]
  • Domain organization of [APOE_HUMAN] by SWISSPFAM
  • Other resources with information on 1H7I
  • Community annotation for 1H7I at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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