1HAV	Hydrolase	date	Oct 23, 1996
title	Hepatitis A Virus 3c Proteinase
authors	E.M.Bergmann, M.N.G.James
compound		source
Molecule: Hepatitis A Virus 3c Proteinase Chain: A Synonym: Picornain 3c Ec: 2.7.7.48 Engineered: Yes Mutation: Yes		Organism_scientific: Hepatitis A Virus Organism_taxid: 12092 Gene: 3c Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_plasmid: Phav-3cex Expression_system_gene: 3c
Molecule: Hepatitis A Virus 3c Proteinase Chain: B Synonym: Picornain 3c Ec: 2.7.7.48 Engineered: Yes Mutation: Yes		Organism_scientific: Hepatitis A Virus Organism_taxid: 12092 Gene: 3c Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_plasmid: Phav-3cex Expression_system_gene: 3c
symmetry	Space Group: P 1	R_factor 0.211 R_Free 0.265
crystal cell	length a length b length c angle alpha angle beta angle gamma 53.600 53.550 53.200 99.08 129.00 103.31
method	X-Ray Diffraction	resolution	2.00 Å
ligand	CL, OCS	enzyme	Transferase E.C.2.7.7.48 BRENDA
related structures	by homologous chain: 1QA7
Gene Ontology	Chain Function Process Component A, B
Primary reference	The refined crystal structure of the 3C gene product from hepatitis A virus: specific proteinase activity and RNA recognition., Bergmann EM, Mosimann SC, Chernaia MM, Malcolm BA, James MN, J Virol 1997 Mar;71(3):2436-48. PMID:9032381

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk] Biological Unit Coordinates (1hav.pdb1.gz) 68 Kb Biological Unit Coordinates (1hav.pdb2.gz) 68 Kb Biological Unit Coordinates (1hav.pdb3.gz) 35 Kb Biological Unit Coordinates (1hav.pdb4.gz) 35 Kb LPC: Ligand-Protein Contacts for 1HAV CSU: Contacts of Structural Units for 1HAV Likely Quarternary Molecular Structure file(s) for 1HAV Retrieve 1HAV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1HAV from S2C, [Save to disk]

View 1HAV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1HAV

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1HAV, from MSDmotif at EBI Genome occurence of 1HAV's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1hava_, region A [Jmol] [rasmolscript] [script source]     - Domain d1havb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1hav_B] [1hav_A] [1hav] SWISS-PROT database: [P08617] Domain organization of [POLG_HAVHM] by SWISSPFAM

Other resources with information on 1HAV

Community annotation for 1HAV at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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