1HBS Oxygen Transport date Jun 02, 1982
title Refined Crystal Structure Of Deoxyhemoglobin S. I. Restrained Least-Squares Refinement At 3.0-Angstroms Resolution
authors E.A.Padlan, W.E.Love
compound source
Molecule: Hemoglobin S (Deoxy) (Alpha Chain)
Chain: A, C, E, G
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Hemoglobin S (Deoxy) (Beta Chain)
Chain: B, D, F, H
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 1 21 1
R_factor 0.254 R_Free NULL
length a length b length c angle alpha angle beta angle gamma
63.330 185.660 52.970 90.00 92.69 90.00
method X-Ray Diffractionresolution 3.00 Å
ligand HEM enzyme
related structures by homologous chain: 1CMY, 1S0H
A, E, C, G
  • peroxidase activity

  • F, B, H, D
  • peroxidase activity

  • Primary referenceRefined crystal structure of deoxyhemoglobin S. I. Restrained least-squares refinement at 3.0-A resolution., Padlan EA, Love WE, J Biol Chem 1985 Jul 15;260(14):8272-9. PMID:4008491
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (188 Kb) [Save to disk]
  • Biological Unit Coordinates (1hbs.pdb1.gz) 93 Kb
  • Biological Unit Coordinates (1hbs.pdb2.gz) 93 Kb
  • LPC: Ligand-Protein Contacts for 1HBS
  • CSU: Contacts of Structural Units for 1HBS
  • Likely Quarternary Molecular Structure file(s) for 1HBS
  • Retrieve 1HBS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1HBS from S2C, [Save to disk]
  • View 1HBS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1HBS
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1HBS, from MSDmotif at EBI
  • Genome occurence of 1HBS's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1hbsa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1hbsb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1hbsc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1hbsd_, region D [Jmol] [rasmolscript] [script source]
        - Domain d1hbse_, region E [Jmol] [rasmolscript] [script source]
        - Domain d1hbsf_, region F [Jmol] [rasmolscript] [script source]
        - Domain d1hbsg_, region G [Jmol] [rasmolscript] [script source]
        - Domain d1hbsh_, region H [Jmol] [rasmolscript] [script source]
  • Fold representative 1hbs from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1hbs_C] [1hbs_E] [1hbs_A] [1hbs_D] [1hbs_G] [1hbs_B] [1hbs_H] [1hbs] [1hbs_F]
  • SWISS-PROT database: [P69905] [P68871]
  • Belongs to the pore-forming globin (globin) family according to TCDB.
  • Belongs to the pore-forming globin (globin) family according to TCDB.
  • Domain organization of [HBA_HUMAN] [HBB_HUMAN] by SWISSPFAM
  • Other resources with information on 1HBS
  • Community annotation for 1HBS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1HBS from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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