1HCR Dna Binding Protein Dna date Dec 17, 1993
title Hin Recombinase Bound To Dna: The Origin Of Specificity In Major And Minor Groove Interactions
authors J.A.Feng, R.C.Johnson, R.E.Dickerson
compound source
Molecule: Dna (5'- D(Tpgptptptptptpgpaptpapapgpa)-3');
Chain: B
Engineered: Yes


Molecule: Dna (5'- D(Tpcptptpaptpcpapapapapapc)-3');
Chain: C
Engineered: Yes


Molecule: Protein (Hin Recombinase)
Chain: A
Engineered: Yes

symmetry Space Group: C 2 2 21
R_factor 0.228 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
84.920 81.370 44.040 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
note 1HCR is a representative structure
related structures by homologous chain: 1JKO
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceHin recombinase bound to DNA: the origin of specificity in major and minor groove interactions., Feng JA, Johnson RC, Dickerson RE, Science 1994 Jan 21;263(5145):348-55. PMID:8278807
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (24 Kb) [Save to disk]
  • Biological Unit Coordinates (1hcr.pdb1.gz) 20 Kb
  • CSU: Contacts of Structural Units for 1HCR
  • Likely Quarternary Molecular Structure file(s) for 1HCR
  • Structure Factors (49 Kb)
  • Retrieve 1HCR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1HCR from S2C, [Save to disk]
  • Re-refined 1hcr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1HCR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1HCR
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1HCR, from MSDmotif at EBI
  • Genome occurence of 1HCR's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1hcra_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1hcr from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1hcr_A] [1hcr_C] [1hcr] [1hcr_B]
  • SWISS-PROT database: [P03013]
  • Domain organization of [HIN_SALTY] by SWISSPFAM
  • Other resources with information on 1HCR
  • Community annotation for 1HCR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1HCR from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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