1HGU Hormone date May 11, 1995
title Human Growth Hormone
authors L.Chantalat, N.Jones, F.Korber, J.Navaza, A.G.Pavlovsky
compound source
Molecule: Human Growth Hormone
Chain: A
Synonym: Human Somatotropin
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 41 21 2
R_factor 0.212 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
57.020 57.020 130.120 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
note 1HGU (Molecule of the Month:pdb52)
related structures by homologous chain: 1A22, 1HWG
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (38 Kb) [Save to disk]
  • Biological Unit Coordinates (1hgu.pdb1.gz) 32 Kb
  • CSU: Contacts of Structural Units for 1HGU
  • Likely Quarternary Molecular Structure file(s) for 1HGU
  • Structure Factors (46 Kb)
  • Retrieve 1HGU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1HGU from S2C, [Save to disk]
  • Re-refined 1hgu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1HGU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1HGU
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1HGU, from MSDmotif at EBI
  • Genome occurence of 1HGU's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1hgu__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 1hgu from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1hgu_A] [1hgu]
  • SWISS-PROT database: [P01241]
  • Domain organization of [SOMA_HUMAN] by SWISSPFAM
  • Alignments of the sequence of 1HGU with the sequences similar proteins can be viewed for 1HGU's classification [SOMA_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [SOMA_HUMAN] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 1HGU
  • Community annotation for 1HGU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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