1HLT	Hydrolase Hydrolase Inhibitor	date	Aug 28, 1994
title	The Structure Of A Nonadecapeptide Of The Fifth Egf Domain O Thrombomodulin Complexed With Thrombin
authors	A.Tulinsky, I.I.Mathews
compound		source
Molecule: Alpha-Thrombin (Small Subunit) Chain: L, J Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
Molecule: Alpha-Thrombin (Large Subunit) Chain: H, K Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
Molecule: Thrombomodulin Chain: R Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: P 43	R_factor 0.146 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 50.900 50.900 325.800 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.00 Å
ligand	0G6	enzyme
related structures	by homologous chain: 1D3Q, 1DWC
Gene Ontology	Chain Function Process Component H, K J, L
Primary reference	Structure of a nonadecapeptide of the fifth EGF domain of thrombomodulin complexed with thrombin., Mathews II, Padmanabhan KP, Tulinksy A, Sadler JE, Biochemistry 1994 Nov 22;33(46):13547-52. PMID:7947765

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk] Biological Unit Coordinates (1hlt.pdb1.gz) 94 Kb LPC: Ligand-Protein Contacts for 1HLT CSU: Contacts of Structural Units for 1HLT Likely Quarternary Molecular Structure file(s) for 1HLT Retrieve 1HLT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1HLT from S2C, [Save to disk]

View 1HLT in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1HLT

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1HLT, from MSDmotif at EBI Genome occurence of 1HLT's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1hlt.2, region J:,K [Jmol] [rasmolscript] [script source]     - Domain d1hlt.1, region L:,H [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1hlt_K] [1hlt_I] [1hlt_R] [1hlt_H] [1hlt] [1hlt_L] [1hlt_J] [1hlt_M] SWISS-PROT database: [P00734] [P07204] Domain organization of [THRB_HUMAN] [TRBM_HUMAN] by SWISSPFAM Domain found in 1HLT: [Tryp_SPc ] by SMART

Other resources with information on 1HLT

Community annotation for 1HLT at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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