1HON Ligase (Synthetase) date Apr 26, 1996
title Structure Of Guanine Nucleotide (Gppcp) Complex Of Adenylosu Synthetase From Escherichia Coli At Ph 6.5 And 25 Degree Ce
authors B.W.Poland, Z.Hou, C.Bruns, H.J.Fromm, R.B.Honzatko
compound source
Molecule: Adenylosuccinate Synthetase
Chain: A, B
Ec: 6.3.4.4
Engineered: Yes
Other_details: Native P212121 Crystals Were Soaked With Gpp
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Strain: H1238
symmetry Space Group: P 21 21 21
R_factor 0.186 R_Free 0.230
crystal
cell
length a length b length c angle alpha angle beta angle gamma
72.600 92.910 119.000 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand GNH enzyme Ligase E.C.6.3.4.4 BRENDA
related structures by homologous chain: 1HOO, 1HOP
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceRefined crystal structures of guanine nucleotide complexes of adenylosuccinate synthetase from Escherichia coli., Poland BW, Hou Z, Bruns C, Fromm HJ, Honzatko RB, J Biol Chem 1996 Jun 28;271(26):15407-13. PMID:8663109
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (185 Kb) [Save to disk]
  • Biological Unit Coordinates (1hon.pdb1.gz) 179 Kb
  • LPC: Ligand-Protein Contacts for 1HON
  • CSU: Contacts of Structural Units for 1HON
  • Likely Quarternary Molecular Structure file(s) for 1HON
  • Structure Factors (222 Kb)
  • Retrieve 1HON in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1HON from S2C, [Save to disk]
  • Re-refined 1hon structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1HON in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1HON
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1HON, from MSDmotif at EBI
  • Genome occurence of 1HON's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1hona_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1honb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1hon_A] [1hon] [1hon_B]
  • SWISS-PROT database: [P0A7D4]
  • Domain organization of [PURA_ECOLI] by SWISSPFAM
  • Domain found in 1HON: [Adenylsucc_synt ] by SMART
  • Other resources with information on 1HON
  • Community annotation for 1HON at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1HON from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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