1HR4 Immune System, Membrane Protein date Dec 20, 2000
title Molecular Model Of Domains 3 And 4 Of Membrane Cofactor Protein (Mcp, Cd46)
authors T.S.Jokiranta, C.Bagley, D.L.Gordon
compound source
Molecule: Membrane Cofactor Protein
Chain: A
Fragment: Domains 3-4, Residues 159-284
Synonym: Mcp, Cd46, Trophoblast Leucocyte Common Antigen, Tlx
Organism_scientific: Homo Sapiens
Organism_common: Human
methodTheoretical Model
Primary referenceIdentification of the streptococcal M protein binding site on membrane cofactor protein (CD46)., Giannakis E, Jokiranta TS, Ormsby RJ, Duthy TG, Male DA, Christiansen D, Fischetti VA, Bagley C, Loveland BE, Gordon DL, J Immunol 2002 May 1;168(9):4585-92. PMID:11971006
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1HR4
  • SEQRES to COORDINATES correlation for 1HR4 from S2C, [Save to disk]
  • View 1HR4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1HR4
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 1hr4 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • SWISS-PROT database: [P15529]
  • Domain organization of [MCP_HUMAN] by SWISSPFAM
  • Other resources with information on 1HR4
  • Community annotation for 1HR4 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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