1HRF Growth Factor date Jul 21, 1994
title Solution Structure Of The Epidermal Growth Factor-Like Domai Heregulin-Alpha, A Ligand For P180erb4
authors K.Nagata, D.Kohda, H.Hatanaka, S.Ichikawa, F.Inagaki
compound source
Molecule: Heregulin Alpha
Chain: A
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
methodSolution NMR
related structures by homologous chain: 1HRE
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of the epidermal growth factor-like domain of heregulin-alpha, a ligand for p180erbB-4., Nagata K, Kohda D, Hatanaka H, Ichikawa S, Matsuda S, Yamamoto T, Suzuki A, Inagaki F, EMBO J 1994 Aug 1;13(15):3517-23. PMID:8062828
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (202 Kb) [Save to disk]
  • Biological Unit Coordinates (1hrf.pdb1.gz) 20 Kb
  • CSU: Contacts of Structural Units for 1HRF
  • Retrieve 1HRF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1HRF from S2C, [Save to disk]
  • View 1HRF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1HRF
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1HRF, from MSDmotif at EBI
  • Genome occurence of 1HRF's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1hrf__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 1hrf from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1hrf_A] [1hrf]
  • SWISS-PROT database: [Q02297]
  • Domain organization of [NRG1_HUMAN] by SWISSPFAM
  • Domain found in 1HRF: [EGF ] by SMART
  • Other resources with information on 1HRF
  • Community annotation for 1HRF at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1HRF from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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