1HTB Oxidoreductase date Aug 10, 1995
title Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 Mg Mm Sodium Phosphate (Ph 7.5), 7.5 Mm Nad+ And 1 Mm 4-Iodopy 25 C
authors T.D.Hurley, G.J.Davis
compound source
Molecule: Beta3 Alcohol Dehydrogenase
Chain: A, B
Synonym: Beta3 Adh
Ec: 1.1.1.1
Engineered: Yes
Other_details: Homodimeric With One Nad+ And One 4-Iodopyra Subunit
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Liver
Gene: Human Beta3 Cdna
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pkk223-3
Expression_system_gene: Human Beta3 Cdna
symmetry Space Group: P 1
R_factor 0.175 R_Free 0.243
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.030 44.430 92.740 92.71 103.17 69.15
method X-Ray Diffractionresolution 2.40 Å
ligand CL, NAD, PYZ, ZN enzyme Oxidoreductase E.C.1.1.1.1 BRENDA
note 1HTB (Molecule of the Month:pdb13)
related structures by homologous chain: 1ADB, 1M6W
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceX-ray structure of human beta3beta3 alcohol dehydrogenase. The contribution of ionic interactions to coenzyme binding., Davis GJ, Bosron WF, Stone CL, Owusu-Dekyi K, Hurley TD, J Biol Chem 1996 Jul 19;271(29):17057-61. PMID:8663387
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (122 Kb) [Save to disk]
  • Biological Unit Coordinates (1htb.pdb1.gz) 116 Kb
  • LPC: Ligand-Protein Contacts for 1HTB
  • CSU: Contacts of Structural Units for 1HTB
  • Likely Quarternary Molecular Structure file(s) for 1HTB
  • Structure Factors (184 Kb)
  • Retrieve 1HTB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1HTB from S2C, [Save to disk]
  • Re-refined 1htb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1HTB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1HTB
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1HTB, from MSDmotif at EBI
  • Genome occurence of 1HTB's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1htba1, region A:1-162,A:339-374 [Jmol] [rasmolscript] [script source]
        - Domain d1htba2, region A:163-338 [Jmol] [rasmolscript] [script source]
        - Domain d1htbb1, region B:1-162,B:339-374 [Jmol] [rasmolscript] [script source]
        - Domain d1htbb2, region B:163-338 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1htb] [1htb_B] [1htb_A]
  • SWISS-PROT database: [P00325]
  • Domain organization of [ADH1B_HUMAN] by SWISSPFAM
  • Other resources with information on 1HTB
  • Community annotation for 1HTB at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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