1HTR Aspartyl Protease date Oct 21, 1994
title Crystal And Molecular Structures Of Human Progastricsin At 1 Angstroms Resolution
authors S.A.Moore, A.R.Sielecki, M.N.G.James
compound source
Molecule: Progastricsin (Pro Segment)
Chain: P
Ec: 3.4.23.3
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Stomach
Tissue: Gastric Mucosa Cell: Chief Cells

Molecule: Gastricsin
Chain: B
Ec: 3.4.23.3
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Stomach
Tissue: Gastric Mucosa Cell: Chief Cells
symmetry Space Group: P 42 21 2
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
105.310 105.310 70.420 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.62 Å
ligand
enzyme Hydrolase E.C.3.4.23.3 BRENDA
note 1HTR is a representative structure
related structures by homologous chain: 1AVF
Gene
Ontology
ChainFunctionProcessComponent
B


P


Primary referenceCrystal and molecular structures of human progastricsin at 1.62 A resolution., Moore SA, Sielecki AR, Chernaia MM, Tarasova NI, James MN, J Mol Biol 1995 Mar 31;247(3):466-85. PMID:7714902
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk]
  • Biological Unit Coordinates (1htr.pdb1.gz) 126 Kb
  • Biological Unit Coordinates (1htr.pdb2.gz) 64 Kb
  • CSU: Contacts of Structural Units for 1HTR
  • Likely Quarternary Molecular Structure file(s) for 1HTR
  • Retrieve 1HTR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1HTR from S2C, [Save to disk]
  • View 1HTR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1HTR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1HTR, from MSDmotif at EBI
  • Genome occurence of 1HTR's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1htr.1, region P:,B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1htr_B] [1htr] [1htr_P]
  • SWISS-PROT database: [P20142]
  • Domain organization of [PEPC_HUMAN] by SWISSPFAM
  • Other resources with information on 1HTR
  • Community annotation for 1HTR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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