1HVU	Transferase Rna	date	Jun 30, 1998
title	Human Immunodeficiency Virus Type 1 Reverse Transcriptase Co With A 33-Base Nucleotide Rna Pseudoknot
authors	J.Jaeger, T.Restle, T.A.Steitz
compound		source
Molecule: Rna (33 Nucleotide Rna Pseudoknot) Chain: C, F, I, L Engineered: Yes		Synthetic: Yes
Molecule: Protein (Hiv-1 Reverse Transcriptase) Chain: A, D, G, J Ec: 2.7.7.49 Engineered: Yes Other_details: The Hiv-1 Reverse Transcriptase Is A Heterod Consisting Of Two Subunits: P66 (Chain A) And P51 (Designat B) In This Crystal Form There Are Four Reverse Transcriptas Molecules Plus Four Rna Molecules Per Asymmetric Unit. The Coordinates For One Complex Are Contained In This Entry. Th Crystallographic Symmetry Transformations Given Below Are B The Best Superposition Of This Molecule On The Other Three Heterodimer Complexes.;		Organism_scientific: Human Immunodeficiency Virus 1 Organism_taxid: 11676 Variant: Bh10 Isolate Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Protein (Hiv-1 Reverse Transcriptase) Chain: B, E, H, K Ec: 2.7.7.49 Engineered: Yes Other_details: The Hiv-1 Reverse Transcriptase Is A Heterod Consisting Of Two Subunits: P66 (Chain A) And P51 (Designat B) In This Crystal Form There Are Four Reverse Transcriptas Molecules Plus Four Rna Molecules Per Asymmetric Unit. The Coordinates For One Complex Are Contained In This Entry. Th Crystallographic Symmetry Transformations Given Below Are B The Best Superposition Of This Molecule On The Other Three Heterodimer Complexes.		Organism_scientific: Human Immunodeficiency Virus 1 Organism_taxid: 11676 Variant: Bh10 Isolate Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 1 2 1	R_factor 0.340 R_Free 0.413
crystal cell	length a length b length c angle alpha angle beta angle gamma 166.700 169.200 331.400 90.00 104.50 90.00
method	X-Ray Diffraction	resolution	4.75 Å
ligand		enzyme	Transferase E.C.2.7.7.49 BRENDA
Gene Ontology	Chain Function Process Component A, J, D, G H, K, E, B
Primary reference	The structure of HIV-1 reverse transcriptase complexed with an RNA pseudoknot inhibitor., Jaeger J, Restle T, Steitz TA, EMBO J 1998 Aug 3;17(15):4535-42. PMID:9687519

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (383 Kb) [Save to disk] Biological Unit Coordinates (1hvu.pdb1.gz) 95 Kb Biological Unit Coordinates (1hvu.pdb2.gz) 95 Kb Biological Unit Coordinates (1hvu.pdb3.gz) 95 Kb Biological Unit Coordinates (1hvu.pdb4.gz) 95 Kb CSU: Contacts of Structural Units for 1HVU Likely Quarternary Molecular Structure file(s) for 1HVU Retrieve 1HVU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1HVU from S2C, [Save to disk]

View 1HVU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1HVU

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1HVU, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1hvua2, region A:1-429 [Jmol] [rasmolscript] [script source]     - Domain d1hvua1, region A:430-554 [Jmol] [rasmolscript] [script source]     - Domain d1hvub_, region B [Jmol] [rasmolscript] [script source]     - Domain d1hvud2, region D:1-429 [Jmol] [rasmolscript] [script source]     - Domain d1hvud1, region D:430-554 [Jmol] [rasmolscript] [script source]     - Domain d1hvue_, region E [Jmol] [rasmolscript] [script source]     - Domain d1hvug2, region G:1-429 [Jmol] [rasmolscript] [script source]     - Domain d1hvug1, region G:430-554 [Jmol] [rasmolscript] [script source]     - Domain d1hvuh_, region H [Jmol] [rasmolscript] [script source]     - Domain d1hvuj2, region J:1-429 [Jmol] [rasmolscript] [script source]     - Domain d1hvuj1, region J:430-554 [Jmol] [rasmolscript] [script source]     - Domain d1hvuk_, region K [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1hvu_J] [1hvu_H] [1hvu_C] [1hvu_E] [1hvu_K] [1hvu_I] [1hvu_A] [1hvu_F] [1hvu_B] [1hvu_D] [1hvu] [1hvu_L] [1hvu_G] SWISS-PROT database: [P03366] Domain organization of [POL_HV1B1] by SWISSPFAM

Other resources with information on 1HVU

Community annotation for 1HVU at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Domain movements in 1HVU from the Database of Macromolecular Movements. Images from IMB Jena Image Library of Biological Macromolecules.

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