1HYO CRYSTAL STRUCTURE OF FUMARYLACETOACETATE HYDROLASE COMPLEXED WITH 4-(HYDROXYMETHYLPHOSPHINOYL)-3-OXO-BUTANOIC ACID date
authors Bateman, R.L., Bhanumoorthy, P., Witte, J.F., McClard, R.W., Grompe, M., Timm, D.E.
compound source
symmetry
R_factor
R_Free 0.1990000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.30
ligand ACT, CA, HBU, MG, NI enzyme
related structures by homologous chain: 1QQJ
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceMechanistic inferences from the crystal structure of fumarylacetoacetate hydrolase with a bound phosphorus-based inhibitor., Bateman RL, Bhanumoorthy P, Witte JF, McClard RW, Grompe M, Timm DE, J Biol Chem 2001 May 4;276(18):15284-91. PMID:11154690
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (153 Kb) [Save to disk]
  • Biological Unit Coordinates (1hyo.pdb1.gz) 148 Kb
  • LPC: Ligand-Protein Contacts for 1HYO
  • CSU: Contacts of Structural Units for 1HYO
  • Likely Quarternary Molecular Structure file(s) for 1HYO
  • Structure Factors (1716 Kb)
  • Retrieve 1HYO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1HYO from S2C, [Save to disk]
  • Re-refined 1hyo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1HYO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1HYO
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1HYO 1HYOA 1HYOB from the CEP Server.
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1HYO, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1hyoa1, region A:1-118 [Jmol] [rasmolscript] [script source]
        - Domain d1hyoa2, region A:119-416 [Jmol] [rasmolscript] [script source]
        - Domain d1hyob1, region B:499-618 [Jmol] [rasmolscript] [script source]
        - Domain d1hyob2, region B:619-917 [Jmol] [rasmolscript] [script source]
  • Fold representative 1hyo from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1hyo_B] [1hyo_A] [1hyo]
  • SWISS-PROT database: [P35505]
  • Domain organization of [FAAA_MOUSE] by SWISSPFAM
  • Other resources with information on 1HYO
  • Community annotation for 1HYO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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