1I17	NMR STRUCTURE OF MOUSE DOPPEL 51-157	date
authors	Mo, H., Moore, R.C., Cohen, F.E., Westaway, D., Prusiner, S.B., Wright, P.E., Dyson, H.J.
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction, 20 Models	resolution
related structures	by homologous chain: 1LG4
Gene Ontology	Chain Function Process Component A
Primary reference	Two different neurodegenerative diseases caused by proteins with similar structures., Mo H, Moore RC, Cohen FE, Westaway D, Prusiner SB, Wright PE, Dyson HJ, Proc Natl Acad Sci U S A 2001 Feb 27;98(5):2352-7. PMID:11226243

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (574 Kb) [Save to disk] Biological Unit Coordinates (1i17.pdb1.gz) 29 Kb CSU: Contacts of Structural Units for 1I17 Original NMR restraints for 1I17 from PDB Retrieve 1I17 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1I17 from S2C, [Save to disk]

View 1I17 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1I17

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 1I17, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1i17a_, region A [Jmol] [rasmolscript] [script source] Fold representative 1i17 from FSSP and Dali (Families of Structurally Similar Proteins) Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1i17] [1i17_A] SWISS-PROT database: [Q9QUG3] Domain organization of [PRND_MOUSE] by SWISSPFAM

Other resources with information on 1I17

Community annotation for 1I17 at PDBWiki (http://pdbwiki.org) NMR Ensemble (OLDERADO: core, domain and representative structure database) MMDB (Entrez's Structure Database)

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