1I6C Isomerase date Mar 02, 2001
title Solution Structure Of Pin1 Ww Domain
authors R.Wintjens, J.M.Wieruszeski, H.Drobecq, G.Lippens, I.Landrieu
compound source
Molecule: Peptidyl-Prolyl Cis-Trans Isomerase Nima-Interact
Chain: A
Fragment: Ww Domain (Residues 6-44)
Ec: 5.2.1.8
Engineered: Yes
 Synthetic: Yes
Other_details: The Pin1 Ww Domain Was Obtained By Peptide S Using The Boc-Benzyl Strategy And The Hbtu In Situ Activati Protocol On A Applied Biosystems 430a Peptide Synthesizer. Protein Is Naturally Found In Homo Sapiens (Human).
methodSolution NMR
ligand
enzyme Isomerase E.C.5.2.1.8 BRENDA
related structures by homologous chain: 1F8A
Primary reference1H NMR study on the binding of Pin1 Trp-Trp domain with phosphothreonine peptides., Wintjens R, Wieruszeski JM, Drobecq H, Rousselot-Pailley P, Buee L, Lippens G, Landrieu I, J Biol Chem 2001 Jul 6;276(27):25150-6. PMID:11313338
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (108 Kb) [Save to disk]
  • Biological Unit Coordinates (1i6c.pdb1.gz) 11 Kb
  • CSU: Contacts of Structural Units for 1I6C
  • Original NMR restraints for 1I6C from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1I6C in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1I6C from S2C, [Save to disk]
    • View 1I6C in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1I6C
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1I6C, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1i6ca_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1i6c_A] [1i6c]
  • SWISS-PROT database: [Q13526]
  • Domain organization of [PIN1_HUMAN] by SWISSPFAM
  • Domain found in 1I6C: [WW ] by SMART
    • Other resources with information on 1I6C
  • Community annotation for 1I6C at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 1I6C from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science