1I7I	Transcription	date	Mar 09, 2001
title	Crystal Structure Of The Ligand Binding Domain Of Human Ppar Complex With The Agonist Az 242
authors	J.F.W.Petersen, P.Cronet, R.Folmer, N.Blomberg, K.Sjoblom, U.Karl L.Lindstedt, K.Bamberg
compound		source
Molecule: Peroxisome Proliferator Activated Receptor Gamma Chain: A, B Fragment: Ligand Binding Domain Synonym: Ppar-Gamma Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 1 2 1	R_factor 0.238 R_Free 0.284
crystal cell	length a length b length c angle alpha angle beta angle gamma 92.928 61.781 118.981 90.00 101.52 90.00
method	X-Ray Diffraction	resolution	2.35 Å
ligand	AZ2 BindingDB	enzyme
related structures	by homologous chain: 1RDT, 2GWX
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structure of the PPARalpha and -gamma ligand binding domain in complex with AZ 242; ligand selectivity and agonist activation in the PPAR family., Cronet P, Petersen JF, Folmer R, Blomberg N, Sjoblom K, Karlsson U, Lindstedt EL, Bamberg K, Structure (Camb) 2001 Aug;9(8):699-706. PMID:11587644

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (90 Kb) [Save to disk] Biological Unit Coordinates (1i7i.pdb1.gz) 43 Kb Biological Unit Coordinates (1i7i.pdb2.gz) 44 Kb LPC: Ligand-Protein Contacts for 1I7I CSU: Contacts of Structural Units for 1I7I Likely Quarternary Molecular Structure file(s) for 1I7I Retrieve 1I7I in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1I7I from S2C, [Save to disk]

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Visual 3D analysis of 1I7I

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1I7I, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1i7ia_, region A [Jmol] [rasmolscript] [script source]     - Domain d1i7ib_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1i7i_B] [1i7i] [1i7i_A] SWISS-PROT database: [P37231] Domain organization of [PPARG_HUMAN] by SWISSPFAM Domain found in 1I7I: [HOLI ] by SMART

Other resources with information on 1I7I

Community annotation for 1I7I at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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