1IFP Virus date Jan 22, 1998
title Inovirus (Filamentous Bacteriophage) Strain Pf3 Major Coat Protein Assembly
authors L.C.Welsh, M.F.Symmons, R.N.Perham, D.A.Marvin
compound source
Molecule: Major Coat Protein Assembly
Chain: A
Synonym: Pf3 Inovirus
Engineered: Yes
Organism_scientific: Pseudomonas Phage Pf3
Organism_taxid: 10872
Strain: New York
Expression_system: Pseudomonas Aeruginosa
Expression_system_taxid: 287
Other_details: Filamentous Bacteriophage
symmetry Space Group: P 1
R_factor 0.170 R_Free 0.390
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Fiber Diffractionresolution 3.10 Å
note 1IFP is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the capsid of Pf3 filamentous phage determined from X-ray fibre diffraction data at 3.1 A resolution., Welsh LC, Symmons MF, Sturtevant JM, Marvin DA, Perham RN, J Mol Biol 1998;283(1):155-77. PMID:9761681
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (10 Kb) [Save to disk]
  • Biological Unit Coordinates (1ifp.pdb1.gz) 154 Kb
  • CSU: Contacts of Structural Units for 1IFP
  • Likely Quarternary Molecular Structure file(s) for 1IFP
  • Structure Factors (12 Kb)
  • Retrieve 1IFP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1IFP from S2C, [Save to disk]
  • View 1IFP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1IFP
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1IFP, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ifp__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 1ifp from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ifp] [1ifp_A]
  • SWISS-PROT database: [P03623]
  • Domain organization of [CAPSD_BPPF3] by SWISSPFAM
  • Other resources with information on 1IFP
  • Community annotation for 1IFP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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