1IGR Hormone Receptor date Sep 28, 1998
title Type 1 Insulin-Like Growth Factor Receptor (Domains 1-3)
authors T.P.J.Garrett, N.M.Mckern, M.Lou, M.J.Frenkel, J.D.Bentley, G.O.L T.C.Elleman, L.J.Cosgrove, C.W.Ward
compound source
Molecule: Insulin-Like Growth Factor Receptor 1
Chain: A
Fragment: Unp Residues 31-492
Ec: 2.7.10.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Placenta
Cellular_location: Cytoplasmic Membrane
Expression_system: Cricetulus Griseus
Expression_system_common: Chinese Hamster
Expression_system_taxid: 10029
Expression_system_cell_line: Lec8
Expression_system_collection: Crl:1737
Expression_system_cellular_location: Secreted
Expression_system_plasmid: Pee14igf-1r462
Other_details: Large Scale Cell Culture In A Cellgen Plus B
symmetry Space Group: P 21 21 21
R_factor 0.237 R_Free 0.304
crystal
cell
length a length b length c angle alpha angle beta angle gamma
77.390 99.720 120.290 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand BMA, FUC, MAN, NAG, SO4 enzyme Transferase E.C.2.7.10.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of the first three domains of the type-1 insulin-like growth factor receptor., Garrett TP, McKern NM, Lou M, Frenkel MJ, Bentley JD, Lovrecz GO, Elleman TC, Cosgrove LJ, Ward CW, Nature 1998 Jul 23;394(6691):395-9. PMID:9690478
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk]
  • Biological Unit Coordinates (1igr.pdb1.gz) 79 Kb
  • LPC: Ligand-Protein Contacts for 1IGR
  • CSU: Contacts of Structural Units for 1IGR
  • Likely Quarternary Molecular Structure file(s) for 1IGR
  • Retrieve 1IGR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1IGR from S2C, [Save to disk]
  • View 1IGR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1IGR
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1IGR, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1igra1, region A:1-149 [Jmol] [rasmolscript] [script source]
        - Domain d1igra3, region A:150-299 [Jmol] [rasmolscript] [script source]
        - Domain d1igra2, region A:300-478 [Jmol] [rasmolscript] [script source]
  • Fold representative 1igr from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1igr_A] [1igr]
  • SWISS-PROT database: [P08069]
  • Domain organization of [IGF1R_HUMAN] by SWISSPFAM
  • Domain found in 1IGR: [FU ] by SMART
  • Other resources with information on 1IGR
  • Community annotation for 1IGR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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