1IH9 Antibiotic date Apr 19, 2001
title Nmr Structure Of Zervamicin Iib (Peptaibol Antibiotic) Bound Micelles
authors Z.O.Shenkarev, T.A.Balasheva, R.G.Efremov, Z.A.Yakimenko, T.V.Ovchinnikova, J.Raap, A.S.Arseniev
compound source
Molecule: Zervamicin Iib
Chain: A
Organism_scientific: Emericellopsis Salmosynnemata
Organism_taxid: 118885
Strain: 336 Imi 58330
methodSolution NMR
ligand ACE, AIB, DIV, HYP, PHL enzyme
Primary referenceSpatial structure of zervamicin IIB bound to DPC micelles: implications for voltage-gating., Shenkarev ZO, Balashova TA, Efremov RG, Yakimenko ZA, Ovchinnikova TV, Raap J, Arseniev AS, Biophys J 2002 Feb;82(2):762-71. PMID:11806918
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk]
  • Biological Unit Coordinates (1ih9.pdb1.gz) 5 Kb
  • LPC: Ligand-Protein Contacts for 1IH9
  • CSU: Contacts of Structural Units for 1IH9
  • Original NMR restraints for 1IH9 from PDB
  • Retrieve 1IH9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1IH9 from S2C, [Save to disk]
  • View 1IH9 in 3D
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  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
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  • Visual 3D analysis of 1IH9
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  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1IH9, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ih9a_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1ih9 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ih9] [1ih9_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 1IH9
  • Community annotation for 1IH9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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