1IHK Hormone Growth Factor date Apr 19, 2001
title Crystal Structure Of Fibroblast Growth Factor 9 (Fgf9)
authors A.N.Plotnikov, A.V.Eliseenkova, O.A.Ibrahimi, M.A.Lemmon, M.Moha
compound source
Molecule: Glia-Activating Factor
Chain: A
Fragment: Residues 35-208
Synonym: Fibroblast Growth Factor-9, Fgf9, Gaf
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fgf9
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 41 2 2
R_factor 0.203 R_Free 0.226
crystal
cell
length a length b length c angle alpha angle beta angle gamma
87.823 87.823 115.636 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand PO4 enzyme
related structures by homologous chain: 1G82
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of fibroblast growth factor 9 reveals regions implicated in dimerization and autoinhibition., Plotnikov AN, Eliseenkova AV, Ibrahimi OA, Shriver Z, Sasisekharan R, Lemmon MA, Mohammadi M, J Biol Chem 2001 Feb 9;276(6):4322-9. PMID:11060292
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk]
  • Biological Unit Coordinates (1ihk.pdb1.gz) 54 Kb
  • LPC: Ligand-Protein Contacts for 1IHK
  • CSU: Contacts of Structural Units for 1IHK
  • Likely Quarternary Molecular Structure file(s) for 1IHK
  • Retrieve 1IHK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1IHK from S2C, [Save to disk]
  • View 1IHK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1IHK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1IHK, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ihka_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ihk_A] [1ihk]
  • SWISS-PROT database: [P31371]
  • Domain organization of [FGF9_HUMAN] by SWISSPFAM
  • Domain found in 1IHK: [FGF ] by SMART
  • Other resources with information on 1IHK
  • Community annotation for 1IHK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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