1IHM CRYSTAL STRUCTURE ANALYSIS OF NORWALK VIRUS CAPSID date
authors Prasad, B.V., Hardy, M.E., Dokland, T., Bella, J., Rossmann, M.G., Estes, M.K.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.40
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceX-ray crystallographic structure of the Norwalk virus capsid., Prasad BV, Hardy ME, Dokland T, Bella J, Rossmann MG, Estes MK, Science 1999 Oct 8;286(5438):287-90. PMID:10514371
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (231 Kb) [Save to disk]
  • Biological Unit Coordinates (1ihm.pdb1.gz) 13137 Kb
  • CSU: Contacts of Structural Units for 1IHM
  • Likely Quarternary Molecular Structure file(s) for 1IHM
  • Retrieve 1IHM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1IHM from S2C, [Save to disk]
    • View 1IHM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1IHM
  • VIPERdb: visual, structural and computational analysis of 1IHM
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1IHM, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ihma_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1ihmb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1ihmc_, region C [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ihm_C] [1ihm_B] [1ihm_A] [1ihm]
  • SWISS-PROT database: [Q83884]
  • Domain organization of [CAPSD_NVN68] by SWISSPFAM
    • Other resources with information on 1IHM
  • Community annotation for 1IHM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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