1IMJ Hydrolase date May 11, 2001
title Crystal Structure Of The Human Ccg1tafii250-Interacting Factor B (Cib)
authors B.Padmanabhan, T.Kuzuhara, M.Horikoshi
compound source
Molecule: Ccg1-Interacting Factor B
Chain: A
Synonym: Cib
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 2
R_factor 0.189 R_Free 0.235
length a length b length c angle alpha angle beta angle gamma
110.704 44.445 43.601 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand SO4 enzyme
note 1IMJ is a representative structure

Primary referenceThe crystal structure of CCG1/TAF(II)250-interacting factor B (CIB)., Padmanabhan B, Kuzuhara T, Adachi N, Horikoshi M, J Biol Chem. 2004 Mar 5;279(10):9615-24. Epub 2003 Dec 11. PMID:14672934
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (1imj.pdb1.gz) 35 Kb
  • LPC: Ligand-Protein Contacts for 1IMJ
  • CSU: Contacts of Structural Units for 1IMJ
  • Likely Quarternary Molecular Structure file(s) for 1IMJ
  • Retrieve 1IMJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1IMJ from S2C, [Save to disk]
  • View 1IMJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1IMJ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1IMJ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1imja_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1imj from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1imj_A] [1imj]
  • SWISS-PROT database: [Q96IU4]
  • Domain organization of [ABHEB_HUMAN] by SWISSPFAM
  • Other resources with information on 1IMJ
  • Community annotation for 1IMJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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