1ISE Translation date Nov 30, 2001
title Crystal Structure Of A Mutant Of Ribosome Recycling Factor F Escherichia Coli, Arg132gly
authors H.Nakano, T.Yoshida, S.Oka, S.Uchiyama, K.Nishina, T.Ohkubo, H.Kat Y.Yamagata, Y.Kobayashi
compound source
Molecule: Ribosome Recycling Factor
Chain: A
Engineered: Yes
Mutation: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Frr
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet22b(+)
symmetry Space Group: P 1 21 1
R_factor 0.239 R_Free 0.297
crystal
cell
length a length b length c angle alpha angle beta angle gamma
46.024 49.267 49.365 90.00 110.10 90.00
method X-Ray Diffractionresolution 2.20 Å
related structures by homologous chain: 1EK8, 1IS1
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk]
  • Biological Unit Coordinates (1ise.pdb1.gz) 33 Kb
  • CSU: Contacts of Structural Units for 1ISE
  • Likely Quarternary Molecular Structure file(s) for 1ISE
  • Structure Factors (86 Kb)
  • Retrieve 1ISE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ISE from S2C, [Save to disk]
  • Re-refined 1ise structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1ISE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ISE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ISE, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1isea_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ise_A] [1ise]
  • SWISS-PROT database: [P0A805]
  • Domain organization of [RRF_ECOLI] by SWISSPFAM
  • Other resources with information on 1ISE
  • Community annotation for 1ISE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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