1IVT Structural Protein date Mar 29, 2002
title Nmr Structures Of The C-Terminal Globular Domain Of Human Lamin Ac
authors I.Krimm, C.Ostlund, B.Gilquin, J.Couprie, P.Hossenlopp, J.P.Mornon, G.Bonn, J.C.Courvalin, H.J.Worman, S.Zinn-Justin
compound source
Molecule: Lamin Ac
Chain: A
Fragment: C-Terminal Domain
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
related structures by homologous chain: 1UFG
Primary referenceThe Ig-like structure of the C-terminal domain of lamin A/C, mutated in muscular dystrophies, cardiomyopathy, and partial lipodystrophy., Krimm I, Ostlund C, Gilquin B, Couprie J, Hossenlopp P, Mornon JP, Bonne G, Courvalin JC, Worman HJ, Zinn-Justin S, Structure (Camb) 2002 Jun;10(6):811-23. PMID:12057196
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (485 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1IVT
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1IVT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1IVT from S2C, [Save to disk]
  • View 1IVT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1IVT
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1IVT, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ivta_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1ivt from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ivt_A] [1ivt]
  • SWISS-PROT database: [P02545]
  • Domain organization of [LMNA_HUMAN] by SWISSPFAM
  • Other resources with information on 1IVT
  • Community annotation for 1IVT at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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