1IYJ	Gene Regulation Antitumor Protein	date	Aug 28, 2002
title	Structure Of A Brca2-Dss1 Complex
authors	N.P.Pavletich, P.D.Jeffrey, H.J.Yang
compound		source
Molecule: Deleted In Split Handsplit Foot Protein 1 Chain: A, C Synonym: Split Handfoot Deleted Protein 1, Dss1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_cell_line: Sf9 Expression_system_vector_type: Baculovirus Expression_system_vector: Pacg2t
Molecule: Breast Cancer Susceptibility Chain: B, D Fragment: Residues 2335-3151 Synonym: Brca2 Engineered: Yes		Organism_scientific: Rattus Norvegicus Organism_common: Norway Rat Organism_taxid: 10116 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_cell_line: Sf9 Expression_system_vector_type: Baculovirus Expression_system_vector: Pacg2t
symmetry	Space Group: P 43	R_factor 0.244 R_Free 0.295
crystal cell	length a length b length c angle alpha angle beta angle gamma 130.314 130.314 192.615 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.40 Å
Gene Ontology	Chain Function Process Component A, C D, B
Primary reference	BRCA2 function in DNA binding and recombination from a BRCA2-DSS1-ssDNA structure., Yang H, Jeffrey PD, Miller J, Kinnucan E, Sun Y, Thoma NH, Zheng N, Chen PL, Lee WH, Pavletich NP, Science 2002 Sep 13;297(5588):1837-48. PMID:12228710

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (198 Kb) [Save to disk] Biological Unit Coordinates (1iyj.pdb1.gz) 97 Kb Biological Unit Coordinates (1iyj.pdb2.gz) 97 Kb CSU: Contacts of Structural Units for 1IYJ Likely Quarternary Molecular Structure file(s) for 1IYJ Retrieve 1IYJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1IYJ from S2C, [Save to disk]

View 1IYJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1IYJ

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1IYJ, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1iyjb1, region B:2403-2598 [Jmol] [rasmolscript] [script source]     - Domain d1iyjb3, region B:2599-2731 [Jmol] [rasmolscript] [script source]     - Domain d1iyjb4, region B:2732-2760,B:2898-2979 [Jmol] [rasmolscript] [script source]     - Domain d1iyjb2, region B:2761-2897 [Jmol] [rasmolscript] [script source]     - Domain d1iyjb5, region B:2980-3117 [Jmol] [rasmolscript] [script source]     - Domain d1iyjd1, region D:2403-2598 [Jmol] [rasmolscript] [script source]     - Domain d1iyjd3, region D:2599-2731 [Jmol] [rasmolscript] [script source]     - Domain d1iyjd4, region D:2732-2760,D:2898-2979 [Jmol] [rasmolscript] [script source]     - Domain d1iyjd2, region D:2761-2897 [Jmol] [rasmolscript] [script source]     - Domain d1iyjd5, region D:2980-3117 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1iyj_A] [1iyj_D] [1iyj] [1iyj_B] [1iyj_C] SWISS-PROT database: [O35923] [P60896] Domain organization of [BRCA2_RAT] [DSS1_HUMAN] by SWISSPFAM Domains found in 1IYJ: [DSS1_SEM1] [Tower ] by SMART

Other resources with information on 1IYJ

Community annotation for 1IYJ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---