1J9B Oxidoreductase date May 24, 2001
title Arsenate Reductase+0.4m Arsenite From E. Coli
authors P.Martin, B.F.Edwards
compound source
Molecule: Arsenate Reductase
Chain: A
 Organism_scientific: Escherichia Coli
Organism_taxid: 562
Plasmid: R773
symmetry Space Group: P 61 2 2
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
86.613 86.613 116.672 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.26 Å
ligand CS, CZZ, SO4, TAS enzyme
note 1J9B is a representative structure
related structures by homologous chain: 1S3C, 1S3D
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceInsights into the structure, solvation, and mechanism of ArsC arsenate reductase, a novel arsenic detoxification enzyme., Martin P, DeMel S, Shi J, Gladysheva T, Gatti DL, Rosen BP, Edwards BF, Structure (Camb) 2001 Nov;9(11):1071-81. PMID:11709171
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk]
  • Biological Unit Coordinates (1j9b.pdb1.gz) 61 Kb
  • Biological Unit Coordinates (1j9b.pdb2.gz) 121 Kb
  • Biological Unit Coordinates (1j9b.pdb3.gz) 121 Kb
  • LPC: Ligand-Protein Contacts for 1J9B
  • CSU: Contacts of Structural Units for 1J9B
  • Likely Quarternary Molecular Structure file(s) for 1J9B
  • Structure Factors (539 Kb)
  • Retrieve 1J9B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1J9B from S2C, [Save to disk]
  • Re-refined 1j9b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1J9B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1J9B
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Conformational Epitope Prediction for 1J9B from the CEP Server.
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1J9B, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1j9ba_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1j9b from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1j9b] [1j9b_A]
  • SWISS-PROT database: [P08692]
  • Domain organization of [ARSC1_ECOLX] by SWISSPFAM
    • Other resources with information on 1J9B
  • Community annotation for 1J9B at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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