1J9U Cytokine date May 29, 2001
title Theoretical Structure Of Human Interleukin-13
authors J.Zuegg, D.C.Webb, P.S.Foster, M.G.Casarotto
compound source
Molecule: Interleukin-13
Chain: A
Organism_scientific: Homo Sapiens
Organism_common: Human
methodTheoretical Model
Primary referenceStructural model of human IL-13 defines the spatial interactions with the IL-13Ralpha/IL-4Ralpha receptor., Zuegg J, Webb DC, Foster PS, Casarotto MG, Immunol Cell Biol 2001 Aug;79(4):332-9. PMID:11488979
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (30 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1J9U
  • SEQRES to COORDINATES correlation for 1J9U from S2C, [Save to disk]
  • View 1J9U in 3D
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  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1J9U
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 1j9u from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • SWISS-PROT database: [P35225]
  • Domain organization of [IL13_HUMAN] by SWISSPFAM
  • Alignments of the sequence of 1J9U with the sequences similar proteins can be viewed for 1J9U's classification [IL13_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [IL13_HUMAN] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 1J9U
  • Community annotation for 1J9U at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Domain movements in 1J9U from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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