1JB5 Protein Transport date Jun 01, 2001
title Crystal Structure Of Ntf2 M118e Mutant
authors C.Chaillan-Huntington, P.J.Butler, J.A.Huntington, D.Akin, C.Fel M.Stewart
compound source
Molecule: Nuclear Transport Factor 2
Chain: A, B
Engineered: Yes
Mutation: Yes
 Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.203 R_Free 0.289
crystal
cell
length a length b length c angle alpha angle beta angle gamma
34.680 78.210 41.430 90.00 104.55 90.00
method X-Ray Diffractionresolution 2.30 Å
related structures by homologous chain: 1ASK, 1GY5
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceNTF2 monomer-dimer equilibrium., Chaillan-Huntington C, Butler PJ, Huntington JA, Akin D, Feldherr C, Stewart M, J Mol Biol 2001 Nov 30;314(3):465-77. PMID:11846560
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (1jb5.pdb1.gz) 42 Kb
  • CSU: Contacts of Structural Units for 1JB5
  • Likely Quarternary Molecular Structure file(s) for 1JB5
  • Retrieve 1JB5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1JB5 from S2C, [Save to disk]
    • View 1JB5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1JB5
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1JB5, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1jb5a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1jb5b_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1jb5] [1jb5_B] [1jb5_A]
  • SWISS-PROT database: [P61972]
  • Domain organization of [NTF2_RAT] by SWISSPFAM
    • Other resources with information on 1JB5
  • Community annotation for 1JB5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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