1JFW Viral Protein date Jun 22, 2001
title Homonuclear And Heteronuclear 1h-13c Nuclear Magnetic Resona Assignment And Structural Characterization Of A Hiv-1 Tat P
authors J.M.Peloponese, C.Gregoire, S.Opi, D.Esquieu
compound source
Molecule: Tat Protein
Chain: A
Synonym: Transactivating Regulatory Protein
Engineered: Yes
 Synthetic: Yes
Other_details: This Peptide Was Synthesized (Solid Phase Sy The Sequence Of This Peptide Occurs Naturally In Human Immunodeficiency Virus Type 1
methodSolution NMR
note 1JFW supersedes 1FKU
related structures by homologous chain: 1K5K, 1TIV
Gene
Ontology
ChainFunctionProcessComponent
A


Primary reference1H-13C nuclear magnetic resonance assignment and structural characterization of HIV-1 Tat protein., Peloponese JM Jr, Gregoire C, Opi S, Esquieu D, Sturgis J, Lebrun E, Meurs E, Collette Y, Olive D, Aubertin AM, Witvrow M, Pannecouque C, De Clercq E, Bailly C, Lebreton J, Loret EP, C R Acad Sci III. 2000 Oct;323(10):883-94. PMID:11098404
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (254 Kb) [Save to disk]
  • Biological Unit Coordinates (1jfw.pdb1.gz) 23 Kb
  • CSU: Contacts of Structural Units for 1JFW
  • Retrieve 1JFW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1JFW from S2C, [Save to disk]
    • View 1JFW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1JFW
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1JFW, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1jfwa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1jfw] [1jfw_A]
  • SWISS-PROT database: [P04610]
  • Domain organization of [TAT_HV1BR] by SWISSPFAM
    • Other resources with information on 1JFW
  • Community annotation for 1JFW at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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