1JLH	Isomerase	date	Jul 16, 2001
title	Human Glucose-6-Phosphate Isomerase
authors	A.T.Cordeiro
compound		source
Molecule: Phosphoglucose Isomerase Chain: A, B, C, D Synonym: Pgi, Glucose Phosphate Isomerase Ec: 5.3.1.9 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet29-A(+)
symmetry	Space Group: P 21 21 21	R_factor 0.197 R_Free 0.237
crystal cell	length a length b length c angle alpha angle beta angle gamma 80.750 108.021 271.073 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand		enzyme	Isomerase E.C.5.3.1.9 BRENDA
related structures	by homologous chain: 1HOX, 1XTB
Gene Ontology	Chain Function Process Component A, D, C, B cytokine activity growth factor activity
Primary reference	Crystal structure of human phosphoglucose isomerase and analysis of the initial catalytic steps., Cordeiro AT, Godoi PH, Silva CH, Garratt RC, Oliva G, Thiemann OH, Biochim Biophys Acta 2003 Feb 21;1645(2):117-22. PMID:12573240

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (385 Kb) [Save to disk] Biological Unit Coordinates (1jlh.pdb1.gz) 194 Kb Biological Unit Coordinates (1jlh.pdb2.gz) 191 Kb CSU: Contacts of Structural Units for 1JLH Likely Quarternary Molecular Structure file(s) for 1JLH Structure Factors (1446 Kb) Retrieve 1JLH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1JLH from S2C, [Save to disk] Re-refined 1jlh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1JLH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1JLH

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1JLH, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1jlha_, region A [Jmol] [rasmolscript] [script source]     - Domain d1jlhb_, region B [Jmol] [rasmolscript] [script source]     - Domain d1jlhc_, region C [Jmol] [rasmolscript] [script source]     - Domain d1jlhd_, region D [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1jlh_D] [1jlh] [1jlh_A] [1jlh_C] [1jlh_B] SWISS-PROT database: [P06744] Domain organization of [G6PI_HUMAN] by SWISSPFAM

Other resources with information on 1JLH

Community annotation for 1JLH at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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