1JM7 Antitumor date Jul 17, 2001
title Solution Structure Of The Brca1bard1 Ring-Domain Heterodimer
authors P.S.Brzovic, P.Rajagopal, D.W.Hoyt, M.C.King, R.E.Klevit
compound source
Molecule: Breast Cancer Type 1 Susceptibility Protein
Chain: A
Fragment: Ring-Domain
Synonym: Brca1
Engineered: Yes
Other_details: Residues 104-112 Of Chain A And 123-142 Of Chain B Are Missing In Each Model Due To Disorder.;
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Brca1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21 De3
Expression_system_vector_type: Plamid
Expression_system_plasmid: Pet11a

Molecule: Brca1-Associated Ring Domain Protein 1
Chain: B
Fragment: Ring-Domain
Synonym: Bard1
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Bard1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21 De3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet11a
methodSolution NMR
ligand ZN enzyme
Primary referenceStructure of a BRCA1-BARD1 heterodimeric RING-RING complex., Brzovic PS, Rajagopal P, Hoyt DW, King MC, Klevit RE, Nat Struct Biol 2001 Oct;8(10):833-7. PMID:11573085
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (745 Kb) [Save to disk]
  • LPC: Ligand-Protein Contacts for 1JM7
  • CSU: Contacts of Structural Units for 1JM7
  • Retrieve 1JM7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1JM7 from S2C, [Save to disk]
  • View 1JM7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1JM7
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1JM7, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1jm7a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1jm7b_, region B [Jmol] [rasmolscript] [script source]
  • Fold representative 1jm7 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1jm7_A] [1jm7] [1jm7_B]
  • SWISS-PROT database: [Q99728] [P38398]
  • Domain organization of [BARD1_HUMAN] [BRCA1_HUMAN] by SWISSPFAM
  • Domain found in 1JM7: [RING ] by SMART
  • Other resources with information on 1JM7
  • Community annotation for 1JM7 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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