1JNS Isomerase date Jul 25, 2001
title Nmr Structure Of The E. Coli Peptidyl-Prolyl Cistrans-Isome Parvulin 10
authors A.Kuehlewein, G.Voll, B.Schelbert, H.Kessler, G.Fischer, J.U.Rahf G.Gemmecker
compound source
Molecule: Peptidyl-Prolyl Cis-Trans Isomerase C
Chain: A
Synonym: Parvulin, Ppiase C, Rotamase C
Ec: 5.2.1.8
Engineered: Yes
 Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Para
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: M15[Prep4]
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Psep612
methodSolution NMR
ligand
enzyme Isomerase E.C.5.2.1.8 BRENDA
related structures by homologous chain: 1JNT
Gene
Ontology
ChainFunctionProcessComponent
A
  • peptidyl-prolyl cis-trans is...


    • Primary referenceSolution structure of Escherichia coli Par10: The prototypic member of the Parvulin family of peptidyl-prolyl cis/trans isomerases., Kuhlewein A, Voll G, Hernandez Alvarez B, Kessler H, Fischer G, Rahfeld JU, Gemmecker G, Protein Sci 2004 Sep;13(9):2378-87. PMID:15322281
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (436 Kb) [Save to disk]
  • Biological Unit Coordinates (1jns.pdb1.gz) 24 Kb
  • CSU: Contacts of Structural Units for 1JNS
  • Original NMR restraints for 1JNS from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1JNS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1JNS from S2C, [Save to disk]
    • View 1JNS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1JNS
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1JNS, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1jnsa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1jns_A] [1jns]
  • SWISS-PROT database: [P0A9L5]
  • Domain organization of [PPIC_ECOLI] by SWISSPFAM
    • Other resources with information on 1JNS
  • Community annotation for 1JNS at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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