1JNW date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand FMN, MSE, PLP, PO4 enzyme
related structures by homologous chain: 1G77, 1G79
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceActive site structure and stereospecificity of Escherichia coli pyridoxine-5'-phosphate oxidase., di Salvo ML, Ko TP, Musayev FN, Raboni S, Schirch V, Safo MK, J Mol Biol 2002 Jan 18;315(3):385-97. PMID:11786019
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk]
  • Biological Unit Coordinates (1jnw.pdb1.gz) 82 Kb
  • LPC: Ligand-Protein Contacts for 1JNW
  • CSU: Contacts of Structural Units for 1JNW
  • Likely Quarternary Molecular Structure file(s) for 1JNW
  • Structure Factors (151 Kb)
  • Retrieve 1JNW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1JNW from S2C, [Save to disk]
  • Re-refined 1jnw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1JNW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1JNW
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1JNW, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1jnwa_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1jnw from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1jnw] [1jnw_A]
  • SWISS-PROT database: [P0AFI7]
  • Domain organization of [PDXH_ECOLI] by SWISSPFAM
  • Other resources with information on 1JNW
  • Community annotation for 1JNW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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