1JNX Gene Regulation date Jul 26, 2001
title Crystal Structure Of The Brct Repeat Region From The Breast Cancer Associated Protein, Brca1
authors R.S.Williams, R.Green, J.N.M.Glover
compound source
Molecule: Breast Cancer Type 1 Susceptibility Protein
Chain: X
Fragment: Residues 1646-1859
Synonym: Brca1; Breast Cancer 1, Early Onset Breastovarian Cancer Susceptibility Protein Brca1;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Brca1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 61 2 2
R_factor 0.259 R_Free 0.302
crystal
cell
length a length b length c angle alpha angle beta angle gamma
114.844 114.844 122.111 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.50 Å
ligand NI enzyme
related structures by homologous chain: 1N5O, 1T29
Primary referenceCrystal structure of the BRCT repeat region from the breast cancer-associated protein BRCA1., Williams RS, Green R, Glover JN, Nat Struct Biol 2001 Oct;8(10):838-42. PMID:11573086
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (1jnx.pdb1.gz) 34 Kb
  • LPC: Ligand-Protein Contacts for 1JNX
  • CSU: Contacts of Structural Units for 1JNX
  • Likely Quarternary Molecular Structure file(s) for 1JNX
  • Retrieve 1JNX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1JNX from S2C, [Save to disk]
  • View 1JNX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1JNX
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1JNX, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1jnxx1, region X:1649-1757 [Jmol] [rasmolscript] [script source]
        - Domain d1jnxx2, region X:1758-1859 [Jmol] [rasmolscript] [script source]
  • Fold representative 1jnx from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1jnx_X] [1jnx]
  • SWISS-PROT database: [P38398]
  • Domain organization of [BRCA1_HUMAN] by SWISSPFAM
  • Domain found in 1JNX: [BRCT ] by SMART
  • Other resources with information on 1JNX
  • Community annotation for 1JNX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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