1JP2 Hydrolase date Jul 31, 2001
title Molecular Docking Of Competitive Phosphodiesterase Inhibitor, 4-[3-(Cyclopentyloxy)-4-Methoxyphenyl]-2- Pyrrolidinone, Rolipram
authors O.Dym, I.Xenarios, H.Ke, J.Colicelli
compound source
Molecule: Phosphodiesterase 4b
Chain: A
Synonym: Pde4b
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Expression_system: Escherichia Coli
Expression_system_common: Bacteria
methodTheoretical Model
enzyme Hydrolase E.C. BRENDA
Primary referenceMolecular docking of competitive phosphodiesterase inhibitors., Dym O, Xenarios I, Ke H, Colicelli J, Mol Pharmacol 2002 Jan;61(1):20-5. PMID:11752202
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1JP2
  • SEQRES to COORDINATES correlation for 1JP2 from S2C, [Save to disk]
  • View 1JP2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1JP2
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 1jp2 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • SWISS-PROT database: [Q07343]
  • Domain organization of [PDE4B_HUMAN] by SWISSPFAM
  • Other resources with information on 1JP2
  • Community annotation for 1JP2 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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