1JR5 Transcription date Aug 10, 2001
title Solution Structure Of The Anti-Sigma Factor Asia Homodimer
authors J.L.Urbauer, M.F.Simeonov, R.J.Bieber Urbauer, K.Adelman, J.M.Gilmore, E.N.Brody
compound source
Molecule: 10 Kda Anti-Sigma Factor
Chain: A, B
Synonym: Audrey Stevens' Inhibitor
Engineered: Yes
Organism_scientific: Enterobacteria Phage T4
Organism_taxid: 10665
Gene: Asia
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet24b
methodSolution NMR
related structures by homologous chain: 1TLH
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceSolution structure and stability of the anti-sigma factor AsiA: implications for novel functions., Urbauer JL, Simeonov MF, Urbauer RJ, Adelman K, Gilmore JM, Brody EN, Proc Natl Acad Sci U S A 2002 Feb 19;99(4):1831-5. PMID:11830637
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1244 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1JR5
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1JR5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1JR5 from S2C, [Save to disk]
  • View 1JR5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1JR5
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1JR5, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1jr5a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1jr5b_, region B [Jmol] [rasmolscript] [script source]
  • Fold representative 1jr5 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1jr5_B] [1jr5] [1jr5_A]
  • SWISS-PROT database: [P32267]
  • Domain organization of [ASIA_BPT4] by SWISSPFAM
  • Other resources with information on 1JR5
  • Community annotation for 1JR5 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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