1K35 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MSE, SEP, ZN enzyme
related structures by homologous chain: 1PCJ
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of PMM/PGM: an enzyme in the biosynthetic pathway of P. aeruginosa virulence factors., Regni C, Tipton PA, Beamer LJ, Structure (Camb) 2002 Feb;10(2):269-79. PMID:11839312
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk]
  • Biological Unit Coordinates (1k35.pdb1.gz) 73 Kb
  • LPC: Ligand-Protein Contacts for 1K35
  • CSU: Contacts of Structural Units for 1K35
  • Likely Quarternary Molecular Structure file(s) for 1K35
  • Retrieve 1K35 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1K35 from S2C, [Save to disk]
    • View 1K35 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1K35
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1K35, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1k35a2, region A:155-258 [Jmol] [rasmolscript] [script source]
        - Domain d1k35a3, region A:259-367 [Jmol] [rasmolscript] [script source]
        - Domain d1k35a4, region A:368-463 [Jmol] [rasmolscript] [script source]
        - Domain d1k35a1, region A:9-154 [Jmol] [rasmolscript] [script source]
  • Fold representative 1k35 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1k35] [1k35_A]
  • SWISS-PROT database: [P26276]
  • Domain organization of [ALGC_PSEAE] by SWISSPFAM
    • Other resources with information on 1K35
  • Community annotation for 1K35 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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