| Data retrieval |
- Asymmetric unit, PDB entry:
[header only] [complete with coordinates] (51 Kb) [Save to disk]
 - Biological Unit Coordinates (1kb4.pdb1.gz) 46 Kb
- LPC: Ligand-Protein Contacts for 1KB4
- CSU: Contacts of Structural Units for 1KB4
- Likely Quarternary Molecular Structure file(s) for 1KB4
- Structure Factors (126 Kb)
- Retrieve 1KB4 in mmCIF format [Save to disk]
- SEQRES to COORDINATES
correlation for 1KB4
from S2C,
[Save to disk]
- Re-refined 1kb4 structure
from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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| View 1KB4 in 3D |
-
Proteopedia, because life has more than 2D.
- On Jmol, a nice Rasmol like molecule viewer.
This is good for easiest viewing of basic structure.
- On FirstGlance, an
excellent tool for a guided tour on the structure components, by
E. Martz.
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| Visual 3D analysis of 1KB4 |
- Cartoon
representation from PDB Cartoon
- Ramachandran
plot from PDBSum
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| Structure-derived information |
- Electron Density
related parameters from EDS Electron Density Server, at Upsala
- Dipole moment, from Dipole Server at Weizmann Institute
- Crystal Contacts, from CryCo at Weizmann Institute
- 3D motif for 1KB4,
from MSDmotif at EBI
- Classification of representative domains in scop (Structural Classification of Proteins)
- Domain d1kb4a_, region A
[Jmol]
[rasmolscript]
[script source]
- Domain d1kb4b_, region B
[Jmol]
[rasmolscript]
[script source]
- Fold representative 1kb4 from FSSP and Dali (Families of Structurally Similar Proteins)
- Class (fold), Architecture (subfold), Topology, Homologous superfamily from
CATH
- Summaries and structural analyses of PDB data files from
PDBSum
- Identification of Protein Pockets & Cavities at
CASTp
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| Sequence-derived information |
- View one-letter amino acid or nucleotide sequence for each chain: [1kb4_A] [1kb4_B] [1kb4] [1kb4_D] [1kb4_C]
- SWISS-PROT database: [P11473]
- Belongs to the vitamin d3 receptor (vdr) family
according to TCDB. - Domain organization of [VDR_HUMAN] by SWISSPFAM
- Domain found in 1KB4: [ZnF_C4
] by SMART
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Other resources with information on 1KB4 |
- Community annotation for 1KB4 at PDBWiki (http://pdbwiki.org)
- MMDB (Entrez's Structure Database)
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| Movements, Movies and Images |
- Images
from IMB Jena Image Library
of Biological Macromolecules.
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