1KIG Complex (Protease Inhibitor) date Apr 24, 1997
title Bovine Factor Xa
authors A.Wei, R.Alexander, C.H.Chang
compound source
Molecule: Factor Xa
Chain: H
Ec: 3.4.21.6
Engineered: Yes
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Blood
Expression_system: Saccharomyces Cerevisiae
Expression_system_common: Baker'S Yeast
Expression_system_taxid: 4932

Molecule: Factor Xa
Chain: L
Ec: 3.4.21.6
Engineered: Yes

Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Blood
Expression_system: Saccharomyces Cerevisiae
Expression_system_common: Baker'S Yeast
Expression_system_taxid: 4932

Molecule: Anticoagulant Peptide
Chain: I
Synonym: Rtap
Engineered: Yes

Organism_scientific: Ornithodoros Moubata
Organism_taxid: 6938
Organ: Blood
Expression_system: Saccharomyces Cerevisiae
Expression_system_common: Baker'S Yeast
Expression_system_taxid: 4932
symmetry Space Group: P 42 21 2
R_factor 0.187 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
133.100 133.100 68.800 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.00 Å
ligand
enzyme Hydrolase E.C.3.4.21.6 BRENDA
related structures by homologous chain: 1D0D, 1IQH, 1IQJ, 1TAP
Gene
Ontology
ChainFunctionProcessComponent
H


I
  • serine-type endopeptidase in...


  • Primary referenceUnexpected binding mode of tick anticoagulant peptide complexed to bovine factor Xa., Wei A, Alexander RS, Duke J, Ross H, Rosenfeld SA, Chang CH, J Mol Biol 1998;283(1):147-54. PMID:9761680
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (1kig.pdb1.gz) 48 Kb
  • CSU: Contacts of Structural Units for 1KIG
  • Likely Quarternary Molecular Structure file(s) for 1KIG
  • Retrieve 1KIG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1KIG from S2C, [Save to disk]
  • View 1KIG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1KIG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1KIG, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1kigh_, region H [Jmol] [rasmolscript] [script source]
        - Domain d1kigi_, region I [Jmol] [rasmolscript] [script source]
        - Domain d1kigl_, region L [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1kig_H] [1kig_I] [1kig_L] [1kig]
  • SWISS-PROT database: [P00743] [P17726]
  • Domain organization of [FA10_BOVIN] [TAP_ORNMO] by SWISSPFAM
  • Domains found in 1KIG: [EGF] [Tryp_SPc ] by SMART
  • Other resources with information on 1KIG
  • Community annotation for 1KIG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1KIG from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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