1KKL Transferase,Hydrolase Transport Protein date Dec 10, 2001
title L.Casei Hprkp In Complex With B.Subtilis Hpr
authors S.Fieulaine, S.Morera, S.Poncet, A.Galinier, J.Janin, J.Deutscher S.Nessler
compound source
Molecule: Hprk Protein
Chain: A, B, C
Ec: 2.7.1.-, 3.1.3.-
Engineered: Yes
Organism_scientific: Lactobacillus Casei
Organism_taxid: 1582
Gene: Ptsk
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Nm522
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pqe30

Molecule: Phosphocarrier Protein Hpr
Chain: H, I, J
Synonym: Histidine-Containing Protein
Engineered: Yes
Mutation: Yes

Organism_scientific: Bacillus Subtilis
Organism_taxid: 1423
Gene: Ptsh
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Nm522
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pqe30
symmetry Space Group: P 32 1 2
R_factor 0.213 R_Free 0.264
crystal
cell
length a length b length c angle alpha angle beta angle gamma
81.135 81.135 253.192 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.80 Å
ligand CA enzyme Transferase E.C.2.7.1 BRENDA
related structures by homologous chain: 1JB1, 1KKM, 1RZR
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


H, J, I


Primary referenceX-ray structure of a bifunctional protein kinase in complex with its protein substrate HPr., Fieulaine S, Morera S, Poncet S, Mijakovic I, Galinier A, Janin J, Deutscher J, Nessler S, Proc Natl Acad Sci U S A 2002 Oct 15;99(21):13437-41. PMID:12359875
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (122 Kb) [Save to disk]
  • Biological Unit Coordinates (1kkl.pdb1.gz) 231 Kb
  • LPC: Ligand-Protein Contacts for 1KKL
  • CSU: Contacts of Structural Units for 1KKL
  • Likely Quarternary Molecular Structure file(s) for 1KKL
  • Structure Factors (187 Kb)
  • Retrieve 1KKL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1KKL from S2C, [Save to disk]
  • Re-refined 1kkl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1KKL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1KKL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1KKL, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1kkla_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1kklb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1kklc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1kklh_, region H [Jmol] [rasmolscript] [script source]
        - Domain d1kkli_, region I [Jmol] [rasmolscript] [script source]
        - Domain d1kklj_, region J [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1kkl_B] [1kkl_A] [1kkl_H] [1kkl] [1kkl_C] [1kkl_I] [1kkl_J]
  • SWISS-PROT database: [Q9RE09] [P08877]
  • Domain organization of [HPRK_LACCA] [PTHP_BACSU] by SWISSPFAM
  • Other resources with information on 1KKL
  • Community annotation for 1KKL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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